R i k e n E x p r e s s i o n A r r a y D a t a b a s e

Web supplement top page for "Bono, H. et al. Systematic expression profiling of the mouse transcriptome using RIKEN cDNA microarrays".

Statistics of cDNA clones for FANTOM2 and RIKEN cDNA microarray sets
List of cDNA libraries with Tissue Ontology
List of cDNA clones with microarray data (49tissues x RIKEN 20k-1) and EST hits distribution for the comparative analysis

Browse genes with tissue-specific expression

`09` spleen	`58` thymus	`06` kidney	`10` heart
`07` brain	`15` cerebellum	`12` lung	`13` liver
`65` cerebellum_neonate10day	`16` placenta	`17` testis	`83` uterus
`18` pancreas	`20` small_intestine	`22` stomach	`90` colon
`47` skin_neonate10day	`98` bone	`xm` muscle	`B4` adipose

Tissues colored by Tissue Ontology
immune circulator neural germ digestive skin bone muscle adipose

Tissue profiling by GO Slim in Gene Ontology

Number of spots on cDNA microarrays judged to be expressed or not expressed.

	Unknown EST hit	unclassifiable
Expressed	1926	1969
Not expressed	123	210

Files for Resourcerer (rearrayid,cloneid,accession, annotation).

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Hidemasa U Bono